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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs10793108 chr11:74695212 A/G XRRA1 chr11:74518784-74660245:- 0.68 5.52 1.08E-6 Box Plot
ACC rs10843879 chr12:31237196 C/T DDX11 chr12:31226779-31257725:+ 0.82 10.07 8.22E-14 Box Plot
ACC rs10844359 chr12:9812714 A/G LOC374443 chr12:9786015-9811008:+ 1.02 5.34 2.1E-6 Box Plot
ACC rs10864011 chr1:213038621 C/T LQK1 chr1:213029947-213031480:- 0.84 9.6 4.11E-13 Box Plot
ACC rs10864014 chr1:213039831 T/A LQK1 chr1:213029947-213031480:- 0.83 9.77 2.3E-13 Box Plot
ACC rs10864015 chr1:213040774 A/G LQK1 chr1:213029947-213031480:- 0.83 9.77 2.3E-13 Box Plot
ACC rs10864016 chr1:213041270 T/C LQK1 chr1:213029947-213031480:- 0.84 9.84 1.83E-13 Box Plot
ACC rs10864018 chr1:213041440 T/C LQK1 chr1:213029947-213031480:- 0.84 9.84 1.83E-13 Box Plot
ACC rs10864020 chr1:213047331 A/G LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs10864022 chr1:213062067 T/C LQK1 chr1:213029947-213031480:- 0.86 9.69 3.06E-13 Box Plot
ACC rs10864023 chr1:213064567 A/G LQK1 chr1:213029947-213031480:- 0.73 6.32 6.05E-8 Box Plot
ACC rs10864027 chr1:213071051 G/A LQK1 chr1:213029947-213031480:- 0.76 6.27 7.25E-8 Box Plot
ACC rs10864028 chr1:213078530 T/C LQK1 chr1:213029947-213031480:- 0.74 6.18 1.02E-7 Box Plot
ACC rs10864029 chr1:213078943 G/T LQK1 chr1:213029947-213031480:- 0.74 6.18 1.02E-7 Box Plot
ACC rs10865489 chr2:88446892 G/T THNSL2 chr2:88469814-88486155:+ 0.82 6.48 3.37E-8 Box Plot